PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0070s0166.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 598aa MW: 65365.8 Da PI: 9.0589

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0070s0166.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0070s0166.2.p 79 FICEVCKKGFLREQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	11.8	0.00072	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Kaladp0070s0166.2.p 155 WKCQKCSKKYAVQSDWKAHSKTC 177 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MAAEAGWLFG LRGEEEDENQ LRMNMHRQFQ QSSHPSAKST MRASADAAPS TQKKKRTQPD 60 PDAEVIALSP KTLMATNRFI CEVCKKGFLR EQNLQLHRRG HNLPWKLKQK STKEVKKKVY 120 LCPEPTCVHH DPARALGDLT GIKKHFSRKH GEKNWKCQKC SKKYAVQSDW KAHSKTCGTK 180 EYRCDCGTLF SRRDSFVTHR AFCDALAREN AMNPTNLNAI TSQLFGPNRV FGNQIRPHHQ 240 GLNFHQHNTQ QPSNNLPAAH IGDGFRPFNS LLPPLSGSAV RPNSTIVFGS SDYHEEDQDH 300 HSPHKVVFSG MMQQLPQDHQ IPNEHTDHSF FSNIARKNDS ESPTSDNINP RHLSSSNLFA 360 NQFSTGGAIG GSLNNPRGPT AGLFSGDAIL GDQISPSLYS SSVSLQNTCS NASASAHLSA 420 TALLQKAAQV GSSCSINGSS SLLRSLGNSL SGTSLKHDLK ASPGATNFGA LLGDENNKNL 480 HEIMSSLGGG GSTTTSSMVG TLAKGISGFH DDHQGENNNK LSFGKLREEQ YSKEEPQNLL 540 SASIGGCDRL TRDFLGIGQI VRQMSGGFSE NDMLQLQRGH QMSSKTSIRG SRDFDDH*

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MAAEAGWLFG LRGEEEDENQ LRMNMHRQFQ QSSHPSAKST MRASADAAPS TQKKKRTQPD  60
PDAEVIALSP KTLMATNRFI CEVCKKGFLR EQNLQLHRRG HNLPWKLKQK STKEVKKKVY  120
LCPEPTCVHH DPARALGDLT GIKKHFSRKH GEKNWKCQKC SKKYAVQSDW KAHSKTCGTK  180
EYRCDCGTLF SRRDSFVTHR AFCDALAREN AMNPTNLNAI TSQLFGPNRV FGNQIRPHHQ  240
GLNFHQHNTQ QPSNNLPAAH IGDGFRPFNS LLPPLSGSAV RPNSTIVFGS SDYHEEDQDH  300
HSPHKVVFSG MMQQLPQDHQ IPNEHTDHSF FSNIARKNDS ESPTSDNINP RHLSSSNLFA  360
NQFSTGGAIG GSLNNPRGPT AGLFSGDAIL GDQISPSLYS SSVSLQNTCS NASASAHLSA  420
TALLQKAAQV GSSCSINGSS SLLRSLGNSL SGTSLKHDLK ASPGATNFGA LLGDENNKNL  480
HEIMSSLGGG GSTTTSSMVG TLAKGISGFH DDHQGENNNK LSFGKLREEQ YSKEEPQNLL  540
SASIGGCDRL TRDFLGIGQI VRQMSGGFSE NDMLQLQRGH QMSSKTSIRG SRDFDDH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	8e-96	C2H2 family protein