PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0304.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 347aa    MW: 37499.8 Da    PI: 8.3459
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0304.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000823659123
                         EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                         +kC+ C+k  s+ s +  H    H
  Kaladp0067s0304.1.p 36 FKCHVCHKKLSTASGMAIHVLQvH 59
                         89***************9987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MGKKKKRAST KYWCYYCDRE FDDEKILVQH QKAKHFKCHV CHKKLSTASG MAIHVLQVHK  60
ETVSTVPNAK PGRESTEIDI YGMQGIPPDV LAAHYGEEEE ETPSKLTKYD PSSQLHGAMT  120
SGSFSLSHPP QSAAVPPHPL YNPAMPRPPI GWPLPPRPQP WLQPHSSGHL LGPMGAIHRP  180
LFPVHNVQPP PAAIPAMQSP LPTVPPAPPS FASISVSQPL FPVGSSTNLP AQSSPMLSAS  240
IPLSSPMGSF NGTGGTVMNM HSYASGPNTG GPSIGPPPVI ANKAPAVNSS ANEVYLVWDD  300
EAMSMEERRM SLPKYQVHDE SSQMSSVDAA IDRRILESRL AHRMAF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1434KKKRASTKYWCYYCDREFDDEKILVQHQKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30970.11e-126C2H2 family protein