PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0064s0082.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HB-other
Protein Properties Length: 370aa    MW: 41049.3 Da    PI: 7.9899
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0064s0082.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.56.3e-202479257
                         T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
             Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                         rkR   t+ qle+Lee++e ++yp+++++  +A+k+gLte+qV+ WF+ rR k+k+
  Kaladp0064s0082.3.p 24 RKRKLKTPAQLEALEEYYEDHKYPTESMKSAIAEKIGLTEKQVSGWFCHRRLKDKR 79
                         89****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MEDCNVDSLD GHTEEDKTPV ETNRKRKLKT PAQLEALEEY YEDHKYPTES MKSAIAEKIG  60
LTEKQVSGWF CHRRLKDKRI SKDEALGNGR MDRSSGVIQE HCSGPGQDSC GSTKPGEYKP  120
ADLREVESQW LAGQELSPKN LSHHNRLNTA SLEVDMDDTS SESSLPLRPS HMPQRDAPQM  180
WENSRYLIQN GDAMPSNPKV TIGAQLRRPS GYLKIKPKAE HPAIAAVKRQ LGNSFREDGP  240
PIGIEFHPLP IDAFQEAPKG TTTGPANGIG FLLPNISGSS YHVARSKAQL LIMGLRYQTH  300
IIDPGHSNPL SLITSSLIVD GDHRQTQTKN THRKLIVVSG TFLMEQSMAQ RGCTFNLLPV  360
ITSAFMRRH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.11e-59HB-other family protein