PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0180.6.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 217aa    MW: 24400.7 Da    PI: 5.7896
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0180.6.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.19.6e-28959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+i+n++ rqvtfskRr g++KKA+EL +LCdae+a+i+fs tgkl+eys+
  Kaladp0062s0180.6.p  9 KKIDNTTARQVTFSKRRRGLFKKAHELATLCDAEIALIVFSATGKLFEYSN 59
                         68***********************************************95 PP
2K-box43.91e-1577171599
                K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                          +  ++ + + +  +  +a L ke+++  +e R+l+Ge L+ Lsl+eL+qLe+ Le +l ++ ++K e   ++i+ l++k  el een++L
  Kaladp0062s0180.6.p  77 QAADQPSLELQLESSTYAMLSKELSERTNEVRRLKGEHLQGLSLEELKQLEKSLEVGLLRVVETKGEKAEREINALRQKGAELMEENERL 166
                          4455666677888889999*******9*************************************************************** PP

                K-box  95 rkkle 99 
                          r++le
  Kaladp0062s0180.6.p 167 RMQLE 171
                          **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVRQKIQIKK IDNTTARQVT FSKRRRGLFK KAHELATLCD AEIALIVFSA TGKLFEYSNS  60
SMRQVIERHS LHNENKQAAD QPSLELQLES STYAMLSKEL SERTNEVRRL KGEHLQGLSL  120
EELKQLEKSL EVGLLRVVET KGEKAEREIN ALRQKGAELM EENERLRMQL ESMPEVETVA  180
ASSVPEQGQS SESMAADPPP YDDSSDTSLK LGLPYP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.15e-65MIKC_MADS family protein