PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0062s0180.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 161aa MW: 18335 Da PI: 10.0165 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.9 | 5.5e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKA+EL +LCdae+a+i+fs tgkl+eys+ Kaladp0062s0180.4.p 9 KKIDNTTARQVTFSKRRRGLFKKAHELATLCDAEIALIVFSATGKLFEYSN 59 68***********************************************95 PP | |||||||
2 | K-box | 35.9 | 3.1e-13 | 77 | 156 | 5 | 84 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 + ++ + + + + +a L ke+++ +e R+l+Ge L+ Lsl+eL+qLe+ Le +l ++ ++K e ++i+ l++k Kaladp0062s0180.4.p 77 QAADQPSLELQLESSTYAMLSKELSERTNEVRRLKGEHLQGLSLEELKQLEKSLEVGLLRVVETKGEKAEREINALRQKV 156 4455666777888889999*******99**************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MVRQKIQIKK IDNTTARQVT FSKRRRGLFK KAHELATLCD AEIALIVFSA TGKLFEYSNS 60 SMRQVIERHS LHNENKQAAD QPSLELQLES STYAMLSKEL SERTNEVRRL KGEHLQGLSL 120 EELKQLEKSL EVGLLRVVET KGEKAEREIN ALRQKVTSEV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-55 | MIKC_MADS family protein |