PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0049.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 441aa    MW: 49752.7 Da    PI: 8.0673
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0049.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP132.53.8e-411273052133
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................... 65 
                          +gkkdrhski+T++g+RdRR+Rls+++a++fFdLq+ LGfdk+s+tieWL++++k ai e +g+                          
  Kaladp0062s0049.1.p 127 TGKKDRHSKICTAQGLRDRRMRLSLQVARKFFDLQETLGFDKASNTIEWLFNMSKNAIMEVMGSdysrmdgpqrsfvdkcgginnptsgn 216
                          79********************************************************************************99998888 PP

                  TCP  66 ...ssssaseceaesssssasnsssg...................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                             s  ++s ce++++  s++ ++++                   ++++s+ k+ ks + +       k+ r karararert e mr++
  Kaladp0062s0049.1.p 217 etkSIAAPSPCEKNEDTYSSKCKQIAtnqttykdeggcnklksvnRQCRSTSKKLKSYQISF-CPRHTKDARDKARARARERTLEIMRLR 305
                          77633333666555555555534444455566777778888888788888876666666666.577778899*************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MFSSSNSNGD SDCFRQYNGS ISCSSFQFGS TSSPVVLEED QFLVDHLLFM PQEQQKFLFG  60
HEAELPLLDH HDFVDGMIEA GNLIGDQVSN AIPSQNHKKK DGVGSSNYEN KKDSKPVKKP  120
PNKRIRTGKK DRHSKICTAQ GLRDRRMRLS LQVARKFFDL QETLGFDKAS NTIEWLFNMS  180
KNAIMEVMGS DYSRMDGPQR SFVDKCGGIN NPTSGNETKS IAAPSPCEKN EDTYSSKCKQ  240
IATNQTTYKD EGGCNKLKSV NRQCRSTSKK LKSYQISFCP RHTKDARDKA RARARERTLE  300
IMRLRVIQDP DQRLFTTCLE EAAATNPSNI TTFSEQIGSC SPFEQVDEIS GAQSQSLEDL  360
ILHADWEIEG ARFYSSYIFD TTEHHHAVRT TTTAINLVQI KQLKFLTWNE LPENLLYVIK  420
HASAQNGSFN LSSYHFNKNT *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111119KKDSKPVKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-25TCP family protein