PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0061s0057.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 335aa MW: 36054.6 Da PI: 6.0435 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.5 | 1.5e-17 | 237 | 270 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C tkTp+WR gp g+ktLCnaCG++y++ + Kaladp0061s0057.1.p 237 CLHCEMTKTPQWRAGPMGPKTLCNACGVRYKSGR 270 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MSADPTSFAA DDIDCNNFFD HMEDLLDFPE DNSKSTDSAL LGLAWNTSPH SILNPDPLFV 60 GKSTGCTPDL AAALSLPYED IVQMEWLSTF VEDSFSGGNS MTFDRQNLPD TEDPSVAPFQ 120 FLSMSPISVL ESSSSSSSCS EGGKVLPRRP DSNVRIGGGC GRARSKRPRP LAFRPVSATQ 180 LISPPLAFNS FSESRSLTAG QRKKRKMNPL SSATPAAETT SGADLTASQS QAGLRKCLHC 240 EMTKTPQWRA GPMGPKTLCN ACGVRYKSGR LFPEYRPAAS PTFIPSLHSN SHKKVLEMRT 300 SSIDVPAAML PGGKTASDTQ PEFIPNENAM LEYM* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 170 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 9e-42 | GATA family protein |