PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0284.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 349aa    MW: 37760.4 Da    PI: 6.9672
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0284.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18257290134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          C++C  tkTp+WR gp g+ktLCnaCG++y++ +
  Kaladp0060s0284.3.p 257 CQHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 290
                          *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MAGGGPSFAD DFDCGNFFDQ IDDLLDFPDE SCNNNGESGL LCEDFKDFPS IWTQPDTFPG  60
SESVFSGSNS HSASDLSAEL SVPYEDIAEL EWLSTFVEDS FSAGNSLTID VTNSVPSKVV  120
SPSANQFRTS SPVSVLESSS SSYAGGKVMP VKPALPIGGR CGRARSKRPR PSTFSPRPSM  180
QLISPTASFT RPATLFDVGK TGCAEFESFN DTGYSLKMSE SAGKMEHKKK KKMKLSADVN  240
QNKNPNPLSP EVAVRKCQHC EITKTPQWRA GPLGPKTLCN ACGVRYKSGR LFPEYRPAAS  300
PTFVPSVHSN SHKKVLEMRV KACDRTPLVG DSSKIELIPN KNPLVDYM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167171KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.25e-42GATA family protein