PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0060s0166.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 23654.2 Da PI: 8.2055 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.5e-19 | 110 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r +r++lg+f tae Aa+a+++a+ +++g Kaladp0060s0166.1.p 110 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEAAARAYDRAAIEFRG 159 59*******.**********82....48************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 217 aa Download sequence |
MESFITNTSS SISKEEEFSA MVSALKQVIS GDTPPNPQPS SSFTSSEDSH IISLPDIGAC 60 GRCNFDGCLG CDYFPAEKQS HSAVISGGAS EKKRSNEDVG RKRKHRVKKN YRGVRQRPWG 120 KWAAEIRDPR RAARVWLGTF ETAEAAARAY DRAAIEFRGN RAKLNFPMTD YNSASTVAGC 180 DGNLIKTEEA SSNKKVEEEN ADKGSTEMEA SGSLMR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34410.1 | 4e-36 | ERF family protein |