PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0003.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 25395.1 Da PI: 8.9142 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.6 | 2.9e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+n + rqvtfskRr+g+lKKA+ELS+LCd++v v+ifsstgkly+y+s Kaladp0060s0003.1.p 9 ERIDNITSRQVTFSKRRKGLLKKAKELSILCDVQVGVMIFSSTGKLYDYAS 59 69***********************************************86 PP | |||||||
2 | K-box | 78.2 | 2.1e-26 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ +++++e+a L ++++Lq +R++ Ge+L+ L+++eLq+Le+qLe lk iR kK+e+l+++ieel++k +q+en +L+++ Kaladp0060s0003.1.p 82 NSNSDVKYWKNEAATLLHQLQSLQDDHRKIFGEQLSGLTIRELQHLENQLEMNLKCIRMKKDEILIAEIEELRQKGSLIQQENLDLQNQA 171 578899********************************************************************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MGRGKIVIER IDNITSRQVT FSKRRKGLLK KAKELSILCD VQVGVMIFSS TGKLYDYASN 60 GSIKTTIEQY NRVKGDKLHL ANSNSDVKYW KNEAATLLHQ LQSLQDDHRK IFGEQLSGLT 120 IRELQHLENQ LEMNLKCIRM KKDEILIAEI EELRQKGSLI QQENLDLQNQ AMCHITNGEM 180 TAALHTDALR CENGTPVQVR LQLSQPQPQS TNSASGTISL GLHLN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14210.1 | 3e-70 | MIKC_MADS family protein |