PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0059s0359.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 677aa MW: 73594.9 Da PI: 6.9371 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.1e-29 | 218 | 271 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Kaladp0059s0359.2.p 218 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 271 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.2 | 1.8e-13 | 220 | 270 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ Kaladp0059s0359.2.p 220 RVVWSVELHQQFVSAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 270 678***********************************************7 PP | |||||||
3 | Response_reg | 74.4 | 4.2e-25 | 38 | 146 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 vl+vdD+p+ + +l+++l++ y ev+ + +e al ll+e++ +D+++ D+ mp+mdG++ll +e +lp+i+++a ++++ + + Kaladp0059s0359.2.p 38 VLVVDDDPTCLAILERMLKSCLY-EVTKCNRAEVALSLLRENKngYDVVISDVHMPDMDGFKLLVYVGSEM-DLPVIMMSADDTKAVVMK 125 89*********************.***************999999**********************7755.8***************** PP HHHTTESEEEESS--HHHHHH CS Response_reg 89 alkaGakdflsKpfdpeelvk 109 ++ Ga d+l Kp+ +++l + Kaladp0059s0359.2.p 126 VVTHGACDYLIKPVRMDALKN 146 ****************99976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 677 aa Download sequence |
MNLSSGGKRS MSAVASSCGG NWRPVDAASD RFPAGLRVLV VDDDPTCLAI LERMLKSCLY 60 EVTKCNRAEV ALSLLRENKN GYDVVISDVH MPDMDGFKLL VYVGSEMDLP VIMMSADDTK 120 AVVMKVVTHG ACDYLIKPVR MDALKNIWQH VVRKKKHEWK DLEQSRSGEE VENRIAKQTE 180 EADYSSSANE GGSWRNSKRR KEEEEDVDDR DDTSTLKKPR VVWSVELHQQ FVSAVNQLGI 240 DKAVPKKILE LMNVPGLTRE NVASHLQKYR LYLRRISGGV PQHPGVLLNN GFMGSQEGPF 300 GAMSSLTGLD LQAIAASGHL PAQSLAGIQS AVFNKGNTLP GMTMAGIDQR NIFSFENPKT 360 RFGEVQHLQQ MANGKQINLL HGIPTNMESK QLASLHHSES SIGSVNMQPS PHSNSSGSLM 420 MQAPQPQSRA QLLNEPASAQ LSKIPSSIGP LSVSNGIGVV RMRNNNPAHD NRLTGFSPVS 480 KPAPVTSFPM DNSELPGNSF PLASAPGVTA AKGTLHDETN SRIKGPVGYG LNYDMFNETN 540 QLRSHPWELR ALGVQFEGSH RPNNLQGNFD ISPSVKVQQQ NYSVGTTLNA GSLPAVYSSG 600 ERMQQPYGAQ NTSQQITGHS SVKIKGESMS DFDSLPQPYG QEDLMSALLK QHPGSNGAAD 660 DEFDFGGYPP IGNIPV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G16857.2 | 1e-173 | ARR-B family protein |