PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0291.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HD-ZIP

Protein Properties

Length: 235aa MW: 26336.8 Da PI: 8.5891

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0291.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.8	5e-20	74	128	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq + Lee F++n++++ +++eeLA++l+L rqV vWFqNrRa+ k Kaladp0059s0291.1.p 74 RKKLRLSKEQSQLLEESFRQNHTLNPKQKEELADRLNLRPRQVEVWFQNRRARSK 128 788899***********************************************98 PP
2	HD-ZIP_I/II	117	1e-37	74	162	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rlskeq++lLEesF+++++L+p++K+ela +L+l+prqv+vWFqnrRAR k+kq+E ++e+Lkr++ +l+e+n++L+keveeLr+ Kaladp0059s0291.1.p 74 RKKLRLSKEQSQLLEESFRQNHTLNPKQKEELADRLNLRPRQVEVWFQNRRARSKLKQTEIECEYLKRWFGSLTEQNRKLQKEVEELRA 162 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGGVSPTTLT CLDLTISVPG SSSVGDVNMK PLRLVSKRPE PDDNWINIGC PNSSEEAEDN 60 DTDSPKGDHN HPPRKKLRLS KEQSQLLEES FRQNHTLNPK QKEELADRLN LRPRQVEVWF 120 QNRRARSKLK QTEIECEYLK RWFGSLTEQN RKLQKEVEEL RAMKLGPPTV LSARNCEPTP 180 TSSLTMCPRC ERVSSTTAHV DTKPTSGSLP PPPCRIKSRL CSIADSPPPL FSNN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	131	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	1e-68	HD-ZIP family protein