PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0271.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 577aa    MW: 62946 Da    PI: 4.7567
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0271.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.28.2e-1392105691374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          lv++L++cA+a+++++le a +l++++  la++++ +m+++a+yf+eAL++r+++        ++p+e+   n s +   l  f+e++P+
  Kaladp0059s0271.1.p 210 LVHTLMACAQAIQQSKLEVAGTLVNQIGLLAASQAGSMRKVATYFAEALERRIFN--------CHPQESV--NPSFTDLLLMNFYEACPY 289
                          689***************************************************9........3344443..33333334446******* PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                          lkf+h+taNqaIlea++g+++vH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+e+g rLa++Ae+++v+fef+ 
  Kaladp0059s0271.1.p 290 LKFAHFTANQAILEAFSGKKEVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPSPDNTDRLREVGLRLAQLAETIHVDFEFRG 379
                          ****************************************************************************************** PP

                 GRAS 181 lvakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          +va++l+dl+ ++L+++p   E++aVn+v++lhrll++++++e+    vL+++++++P++v+vveqea+hn++ Fl+rf+e+l+yys+lf
  Kaladp0059s0271.1.p 380 FVANSLADLDASKLELNPsdTESIAVNSVFELHRLLARPGAIEK----VLSVIREIKPEIVTVVEQEANHNGPVFLDRFTESLHYYSTLF 465
                          ******************999***********************....****************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
                          dsle +   +s++++++++++lgr+i+nvvaceg +r+erhetl +Wr r+++aGF+pv+++++a kqa++ll  ++ ++gyrvee++g+
  Kaladp0059s0271.1.p 466 DSLEGS---ASSQDKVISEVYLGRQICNVVACEGPDRVERHETLDQWRLRFGSAGFEPVHIGSNAFKQASMLLDLFSgGEGYRVEENNGC 552
                          ****99...699****************************************************************************** PP

                 GRAS 358 lvlgWkdrpLvsvSaWr 374
                          l+lgW++rpL+++SaWr
  Kaladp0059s0271.1.p 553 LMLGWHTRPLIATSAWR 569
                          ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MKRENQYLYP NPDSSGAGSS SGGKGKVCWE DDPLPESGMD ELLAVLGYKV KSSDMAEVAQ  60
KLEQLEEVMG SVREDGLSHL ASETVHYNPS DISNWIENML SEFVPAGFDS SLQPLPPASV  120
HSFIPQLDSS ASVNFPGFGG GDTSLPDYDL KAIPGNQIIY SPKQQQQQID ELGGNANKRL  180
KTTVTATEAP LTTSTRPVVL VDSQEAGVRL VHTLMACAQA IQQSKLEVAG TLVNQIGLLA  240
ASQAGSMRKV ATYFAEALER RIFNCHPQES VNPSFTDLLL MNFYEACPYL KFAHFTANQA  300
ILEAFSGKKE VHVIDFSMNQ GMQWPALMQA LALRPGGPPA FRLTGIGPPS PDNTDRLREV  360
GLRLAQLAET IHVDFEFRGF VANSLADLDA SKLELNPSDT ESIAVNSVFE LHRLLARPGA  420
IEKVLSVIRE IKPEIVTVVE QEANHNGPVF LDRFTESLHY YSTLFDSLEG SASSQDKVIS  480
EVYLGRQICN VVACEGPDRV ERHETLDQWR LRFGSAGFEP VHIGSNAFKQ ASMLLDLFSG  540
GEGYRVEENN GCLMLGWHTR PLIATSAWRV GSTGPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein