PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0058s0639.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 228aa MW: 24866.3 Da PI: 8.8171 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00018 | 42 | 64 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F++ L H +H Kaladp0058s0639.1.p 42 FECKTCGKKFPTFQALGGHRASH 64 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MSLSNHETSS TLTEETAASC LMLLSKVGEY SKTPKDENNK EFECKTCGKK FPTFQALGGH 60 RASHKKPKLE SDSSQLTKQS MMTTPAKPKS HECAICGAEF ALGQALGGHM RRHRDVAGVN 120 GVVFGSKMGE TPSGATTAVQ ASEIPAVLKR SKSKRVCLEL DLNLTPREND LQMESSDSEV 180 GSDLKLQLGK REYEVRAEVG RLQEYDLRMQ IGKRRRFGDG FLGLVAL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 155 | KRSKSKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59820.1 | 1e-34 | C2H2 family protein |