PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0058s0199.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 208aa MW: 22899.4 Da PI: 9.0077 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.4 | 1.7e-10 | 2 | 49 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ++Er+RR+++N+ + Lr+l P+ + kK + a+i ++e++k+L Kaladp0058s0199.1.p 2 SHIAVERNRRRQMNEHLRVLRSLTPSF---YIKKGDQASIIGGVIEFVKEL 49 89************************9...9******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MSHIAVERNR RRQMNEHLRV LRSLTPSFYI KKGDQASIIG GVIEFVKELH QVLQVLDSKK 60 RRKRSLSPSS NPSPRPLLQL CTPSSDSSPS PRLQQGFKEL GACSNSLVAD VEAKLSGANV 120 VLRIVCRRAG GQVGKIVSVL ERLCFDVLQL NISSMEDTVL YSIVIKIGLE CQLSVEELAH 180 VIQKSLYQDE IATASDNATD TLLANYL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 59 | 63 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06120.1 | 1e-72 | bHLH family protein |