PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0055s0364.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 358aa MW: 38676.4 Da PI: 6.4162

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0055s0364.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114	9.9e-36	37	127	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 Fl+k+y++++d +++++isw+e+g++fvv+++ efa++vLpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k Kaladp0055s0364.3.p 37 FLTKTYQLVDDISIDSIISWNEDGTAFVVWNPAEFARDVLPKYFKHNNFSSFVRQLNTYGFRKVMPDR---------WEFSNDCFRRGDK 117 9***************************************************************99.........********* PP XXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkk 101 +ll++i r+k Kaladp0055s0364.3.p 118 RLLCDIVRRK 127 *****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAHQPPPLPL GEQIVAVDLP PPPPTVPDAQ RFIPTPFLTK TYQLVDDISI DSIISWNEDG 60 TAFVVWNPAE FARDVLPKYF KHNNFSSFVR QLNTYGFRKV MPDRWEFSND CFRRGDKRLL 120 CDIVRRKLMS GVSGSSSALT VSAQPVLMDP STSQSGEGQV FSSNSTPTSA APMATVFLDH 180 QNNSGNNIGS SSSNNCGTAA RAHLIDENDR LKKENTQLWK ELSQMKSMCT NIYSMMSNYN 240 PGSGPVPGLG HGLGPPTHAA AGCGSSNNSS QAESVMNPAM NPVAIDLMSS RRLLAAVAEI 300 QAATPAAQPA AEENLCMHSR LFGFQLGSKR ARGDGSSDPM DHEDLLQLQQ PGPSFNH*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAHQPPPLPL GEQIVAVDLP PPPPTVPDAQ RFIPTPFLTK TYQLVDDISI DSIISWNEDG  60
TAFVVWNPAE FARDVLPKYF KHNNFSSFVR QLNTYGFRKV MPDRWEFSND CFRRGDKRLL  120
CDIVRRKLMS GVSGSSSALT VSAQPVLMDP STSQSGEGQV FSSNSTPTSA APMATVFLDH  180
QNNSGNNIGS SSSNNCGTAA RAHLIDENDR LKKENTQLWK ELSQMKSMCT NIYSMMSNYN  240
PGSGPVPGLG HGLGPPTHAA AGCGSSNNSS QAESVMNPAM NPVAIDLMSS RRLLAAVAEI  300
QAATPAAQPA AEENLCMHSR LFGFQLGSKR ARGDGSSDPM DHEDLLQLQQ PGPSFNH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	9e-62	HSF family protein