PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0055s0329.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 394aa MW: 42467.1 Da PI: 8.0611

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0055s0329.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.4	1.2e-13	139	188	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h ++Er+RR+++N+ ++ Lr+l+P + kK + a+i +++YI++Lq Kaladp0055s0329.1.p 139 VSHIAVERNRRKQMNEHLAVLRQLMPCF---YVKKGDQASIIGGVIDYINELQ 188 68***********************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MGTEHLTAPT SLCDLFHESE LCPDEILTIL QSLEDSNNNN IFNVAAAAAA ATAATPGPLM 60 ENKIITNNKN KKRKKPAKTV SSSSPRFGSD EESDEGHAVF SQRKSVRRHK ASPPASSMED 120 VSGEDGGGAA GSNSNGKMVS HIAVERNRRK QMNEHLAVLR QLMPCFYVKK GDQASIIGGV 180 IDYINELQQV LQSLEAKKQR KIYTNEVGLS PRVASSPRLI PQPHSNLSLS PRKPPPSPRP 240 LINLPISPRT PQSTSPYNKP PRQPLIQPSS IASPTSNSNS CSSVAYMIMM MNSYNNSNSN 300 GVANELVASS KSSVADVEVK FCGPNLELKT LSSKIAGQTL KIVSAIEDLA LDILQVSINT 360 AEETMLNSFT IKIGIECQLS AEELAQQIQE TFC*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MGTEHLTAPT SLCDLFHESE LCPDEILTIL QSLEDSNNNN IFNVAAAAAA ATAATPGPLM  60
ENKIITNNKN KKRKKPAKTV SSSSPRFGSD EESDEGHAVF SQRKSVRRHK ASPPASSMED  120
VSGEDGGGAA GSNSNGKMVS HIAVERNRRK QMNEHLAVLR QLMPCFYVKK GDQASIIGGV  180
IDYINELQQV LQSLEAKKQR KIYTNEVGLS PRVASSPRLI PQPHSNLSLS PRKPPPSPRP  240
LINLPISPRT PQSTSPYNKP PRQPLIQPSS IASPTSNSNS CSSVAYMIMM MNSYNNSNSN  300
GVANELVASS KSSVADVEVK FCGPNLELKT LSSKIAGQTL KIVSAIEDLA LDILQVSINT  360
AEETMLNSFT IKIGIECQLS AEELAQQIQE TFC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	75	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	3e-41	bHLH family protein