PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0053s0383.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 251aa MW: 28085.3 Da PI: 10.2658 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.3 | 1.1e-17 | 9 | 70 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Le+lF+ r+p+ +++ +A++l ++ ++V++WFqNr+ +e++ Kaladp0053s0383.1.p 9 STRWNPTREQLSQLESLFNGqgIRTPTPAQINSIARRLlaygPIKGKNVFYWFQNRKGRERR 70 58*****************6568*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 91.9 | 5.7e-30 | 8 | 71 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW+Pt eQ+ Le+l++ +G+rtP+ ++i+ i+++L +yG i++kNVfyWFQNrk Rer++ Kaladp0053s0383.1.p 8 SSTRWNPTREQLSQLESLFNgQGIRTPTPAQINSIARRLLAYGPIKGKNVFYWFQNRKGRERRQ 71 689*****************9*****************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 251 aa Download sequence |
MDPISGRSST RWNPTREQLS QLESLFNGQG IRTPTPAQIN SIARRLLAYG PIKGKNVFYW 60 FQNRKGRERR QKRKMERQQM SANTHNNINS LNNKNNIVFN NLNNNNTENV AVSGYFNRFY 120 DRPPPSISPA LSLTTGRPHS LFQTTPLSVG NLPYYAAQPR FGFFPHCPRT DLPSHLNSPM 180 MFHPRNVISF ATQSNEVNNA EVNDALFGEG SGSRVTPATL DLFPVHPTGI LQERDDGGQS 240 DGDSNLVIID * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G59340.1 | 3e-18 | WOX family protein |