PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0314.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 334aa    MW: 37689.6 Da    PI: 5.0181
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0314.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45.2e-161461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +grWT eEd +l ++v+  G g+W+++++  g++R++k+c++rw +yl
  Kaladp0053s0314.1.p 14 KGRWTDEEDGILTRYVQANGEGSWRSVPKNAGLHRCGKSCRLRWINYL 61
                         79********************************************97 PP
2Myb_DNA-binding48.32.2e-1567112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+ ++eE+  ++++++ +G++ W++Ia +++ gRt++++k++w+++l
  Kaladp0053s0314.1.p  67 RGNISPEEEAVIIRLHASMGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                          7899******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MVRAPCCEKE GLKKGRWTDE EDGILTRYVQ ANGEGSWRSV PKNAGLHRCG KSCRLRWINY  60
LRPDLKRGNI SPEEEAVIIR LHASMGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKLLTFS  120
TPTKSKRTEP DGPTEVTAEW KPRKGRSRQR ASQRNSTALL KHSSLLKSTV ENGELEPIAK  180
EKTVEPNANE ESFEITEYIN EEGEDNTSSL NAEESLIFSS VHEQSYFNDE QSEIFSSFDD  240
ALNIKVDETD NDVSMHNLIA SSVDQKNGIK GSQEVDTVAA NWNEKKSLSL SSADDAWADW  300
DWKGLINGQK LIDEDEMLTM LWDDGSNFKS SNH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.13e-69MYB family protein