PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0301.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 302aa    MW: 33639.4 Da    PI: 6.5058
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0301.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.48.1e-25135196159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          +dDg +WrKYGqK++ +s+fprsY+rC+++   gC ++k+v++s+++p +  +tY g+H+++
  Kaladp0053s0301.1.p 135 VDDGQAWRKYGQKTILNSPFPRSYFRCAHKtnqGCLATKQVQQSRSEPPLYSVTYDGHHTCT 196
                          58*************************9988889**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MSLRNGQQSL SSSTTKIKIT RAIEDELNAG HKSALLLRHC LLHADSISID DNETQGRRIL  60
PELLEKIILS FENSIAKLDD SQDHHQKSEE EVSAKWEEDS GESCKRRASQ RKGRRGCYKR  120
RKGSQSWTKL VPALVDDGQA WRKYGQKTIL NSPFPRSYFR CAHKTNQGCL ATKQVQQSRS  180
EPPLYSVTYD GHHTCTHYLK SPSLFVADST ADHPSVLLSF SNPAESSDQY PPGRPLFGSP  240
PSSDYMLSPE SFAAAFDQGM ASNASSNCSD LEGMEFMNHH EVGVGMCATD FDDLMKLEEF  300
D*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105122KRRASQRKGRRGCYKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.18e-28WRKY family protein