PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0101.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 277aa    MW: 30196.4 Da    PI: 6.8048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0101.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.3e-11156203455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Kaladp0050s0101.1.p 156 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 203
                          8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDPPTMMNQG PHSNMTEIWP FPISGGDDHA GSGEFELRRA HFAQFVGNPI SDASGDESMV  60
YEQRWSRQNG GKKRYEALSG DESAKLVSTS AASGLNDGHG KRNKLLRSTA DNGKGEAADV  120
EGTSGHAATE NNSKPAEPPK QDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP  180
GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS MKLEAINSRH PPGFDAFSSK DFNQQAFDSA  240
GVAAAVYTPQ PPRDYGRPSS PDWLHMQVGG GFDRSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-83bHLH family protein