PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0923.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 365aa MW: 40290.5 Da PI: 7.6571

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0923.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6.1e-18	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +v+q+G +W+++++ g+ R+ k+c++rw +yl Kaladp0048s0923.1.p 33 KGPWTPEEDIILVSYVQQHGASNWRAVPANAGLLRCSKSCRLRWTNYL 80 79****************************99**********97 PP
2	Myb_DNA-binding	46.1	1.1e-14	86	130	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++ Kaladp0048s0923.1.p 86 RGNFTDQEQKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTN 130 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MERSPSRSDD HSHRNSSSGS KTTASASSDG LKKGPWTPEE DIILVSYVQQ HGASNWRAVP 60 ANAGLLRCSK SCRLRWTNYL RPGIKRGNFT DQEQKMIIHL QALLGNRWAA IASYLPQRTD 120 NDIKNYWNTN LRKKAIKNQL GHCGLGEDHE GGSSLLSDSV DQSAATKGQW ERRLQTDINL 180 AKQALSQALA VDDTDLEQAS SDQTRDQLMA GTSNSFIDSV TLSPTITTIY ASSTANISKL 240 LDGWMKKKEP AVPSAATSSY TATQFNGVNQ FGNITCASSS REYYDQFDEY METKPYVDRQ 300 VPLLEKWLMF DDGGNNAAAS SAPGGTSQDQ LAAHELMSTD VTTFDQQNIT KSHKNTLKRH 360 HYSR*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MERSPSRSDD HSHRNSSSGS KTTASASSDG LKKGPWTPEE DIILVSYVQQ HGASNWRAVP  60
ANAGLLRCSK SCRLRWTNYL RPGIKRGNFT DQEQKMIIHL QALLGNRWAA IASYLPQRTD  120
NDIKNYWNTN LRKKAIKNQL GHCGLGEDHE GGSSLLSDSV DQSAATKGQW ERRLQTDINL  180
AKQALSQALA VDDTDLEQAS SDQTRDQLMA GTSNSFIDSV TLSPTITTIY ASSTANISKL  240
LDGWMKKKEP AVPSAATSSY TATQFNGVNQ FGNITCASSS REYYDQFDEY METKPYVDRQ  300
VPLLEKWLMF DDGGNNAAAS SAPGGTSQDQ LAAHELMSTD VTTFDQQNIT KSHKNTLKRH  360
HYSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	1e-88	MYB family protein