PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0420.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24548.5 Da PI: 10.0773 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.2 | 5.6e-20 | 30 | 80 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrd ++ ++r++lg+f++a+ Aa+a++aa+++l+g Kaladp0048s0420.1.p 30 PKFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSADAAARAYDAAARSLRG 80 79********.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGKVRGGATA AAARGNQVKD APLAIGSAEP KFRGVRKRPW GRFAAEIRDP WKKTRVWLGT 60 FDSADAAARA YDAAARSLRG PKARTNFPTP PATPPASPHH LPNDLIAAQR FYNADAYREQ 120 QRVDRANPPR PATSSMSSTV ESFSGPRRQQ TIHPAVASRR FPKSPPVTAD DCHSDCDSSS 180 DVVDGAVEVG VTTSFKKPLA FDLNFPPLDD LGFSGGESEM RCSTALCL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 3e-28 | ERF family protein |