PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0319.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 419aa MW: 45551.8 Da PI: 5.3811

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0319.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.001	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Kaladp0048s0319.1.p 196 YECKTCNRTFPSFQALGGHRASH 218 99**********99999998887 PP
2	zf-C2H2	13.2	0.00027	280	302	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H Kaladp0048s0319.1.p 280 HECSICGAEFSSGQALGGHMRRH 302 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MDYAHNNSTK LQPDDNVSNI VSLIDNGCGR VNDDDDDDDD AVGLIDIKAT TTSGSINSNP 60 SEAPRNKEDD EEEQAQMKNH DNVVTATFQP PTTLITTMMI VKGKRTKRQR LHSPVVLHSY 120 NGNDTAQEEE EDEEEEEDND DEAAEELDMA NCLILLARGQ SPSIRRNELG LFTKLSSSSK 180 RFSSENKRVH GTSSVYECKT CNRTFPSFQA LGGHRASHKK LKITANDHFR QSAISDNTHS 240 PPSPLVITPS PSTLSLQLGN INYYSRAPSA HTNKSGHKVH ECSICGAEFS SGQALGGHMR 300 RHRGPMITLN SSTTTTTTTT TTTNNNNNPI ANTTLSLSTV IAVESPDTAA AKVNRINTSN 360 NNNGLLSLDL NLPASPSPSP EDHDHTNFSL APKQPQPQQP QQQSAVVFST PALVDCFY*

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MDYAHNNSTK LQPDDNVSNI VSLIDNGCGR VNDDDDDDDD AVGLIDIKAT TTSGSINSNP  60
SEAPRNKEDD EEEQAQMKNH DNVVTATFQP PTTLITTMMI VKGKRTKRQR LHSPVVLHSY  120
NGNDTAQEEE EDEEEEEDND DEAAEELDMA NCLILLARGQ SPSIRRNELG LFTKLSSSSK  180
RFSSENKRVH GTSSVYECKT CNRTFPSFQA LGGHRASHKK LKITANDHFR QSAISDNTHS  240
PPSPLVITPS PSTLSLQLGN INYYSRAPSA HTNKSGHKVH ECSICGAEFS SGQALGGHMR  300
RHRGPMITLN SSTTTTTTTT TTTNNNNNPI ANTTLSLSTV IAVESPDTAA AKVNRINTSN  360
NNNGLLSLDL NLPASPSPSP EDHDHTNFSL APKQPQPQQP QQQSAVVFST PALVDCFY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	3e-34	C2H2 family protein