PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0308.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 305aa MW: 33039.3 Da PI: 10.2104 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 54 | 4.5e-17 | 27 | 109 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W ++ v L+ea++ ++ +r+klk+++W+ev++++ + ++++qCk+k+e+++kry+ ++ + s st+p++++++ Kaladp0048s0308.2.p 27 EWGERAVASLLEAYEAKWVLRNRAKLKGHDWQEVARFVsATADAPKTQTQCKNKIESMKKRYRSAAAATAG----SASTWPFYQRIH 109 5*************************************5555679*******************9999997....4779*****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MEKATANHEL PPKPPPCGGG DKLKRDEWGE RAVASLLEAY EAKWVLRNRA KLKGHDWQEV 60 ARFVSATADA PKTQTQCKNK IESMKKRYRS AAAATAGSAS TWPFYQRIHN LLRGDNNNTG 120 GGGSSRAAPQ ISSSPLEAPS PPPFPATAQE SNGLVFKAVE EAEDDAGAKL LLSQPDGAHD 180 KALTHPNSTD SASTTPAFYR DGGKLIRPSS SNARRKRKSG VLVAESVRWL AEAVVRTEKA 240 RMETMRELEK MRIEAEMKRG ELELKRTRII ADTQLQIARL LSGSCVLVPK TADGSPPSFQ 300 PGTS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54390.1 | 9e-59 | Trihelix family protein |