PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0308.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 306aa MW: 33167.5 Da PI: 10.2104 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 54 | 4.6e-17 | 27 | 109 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W ++ v L+ea++ ++ +r+klk+++W+ev++++ + ++++qCk+k+e+++kry+ ++ + s st+p++++++ Kaladp0048s0308.1.p 27 EWGERAVASLLEAYEAKWVLRNRAKLKGHDWQEVARFVsATADAPKTQTQCKNKIESMKKRYRSAAAATAG----SASTWPFYQRIH 109 5*************************************5555679*******************9999997....4779*****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MEKATANHEL PPKPPPCGGG DKLKRDEWGE RAVASLLEAY EAKWVLRNRA KLKGHDWQEV 60 ARFVSATADA PKTQTQCKNK IESMKKRYRS AAAATAGSAS TWPFYQRIHN LLRGDNNNTG 120 GGGSSRAAPQ ISSSPLEAPS PPPFPATAQE SNGLVFKAVE QEAEDDAGAK LLLSQPDGAH 180 DKALTHPNST DSASTTPAFY RDGGKLIRPS SSNARRKRKS GVLVAESVRW LAEAVVRTEK 240 ARMETMRELE KMRIEAEMKR GELELKRTRI IADTQLQIAR LLSGSCVLVP KTADGSPPSF 300 QPGTS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54390.1 | 4e-59 | Trihelix family protein |