PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0047s0062.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 244aa MW: 25862.9 Da PI: 8.61 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.6 | 0.00043 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H Kaladp0047s0062.1.p 94 YKCSVCHKAFPSYQALGGHKASH 116 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MALEALNSPS AAHQMRFEGT EHHLFDKMSK GKRSKRSRSD TGSQIANGAE EEYLAWCLIM 60 LARGVSGRAE SALEVKQSTP LPPQPPAVVL NLSYKCSVCH KAFPSYQALG GHKASHRKNP 120 ATPDTDSSAS TVTAPAFPPS ALNPSGRSHQ CTICHKSFPT GQALGGHKRC HYDGGNSSSA 180 VVTASSDAAG SSHGFDLNLP AQPEMFPGAV VNAWKSQRAV EEEVESPHPS KKPRVFDLGL 240 GQH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 2e-43 | C2H2 family protein |