PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0046s0315.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28196.2 Da PI: 4.5564 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6e-18 | 33 | 83 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa +l+g Kaladp0046s0315.1.p 33 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALICLKG 83 59*****998.**********9...336***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MVKTVVKVEA ADRTTKRTMS SSASSSTTSA AGKKYKGVRM RSWGSWVSEI RAPNQKTRIW 60 LGSYSTAEAA ARAYDAALIC LKGSSATNLN FPLSSPHYLI PDTSTLMSPK SIQRVAAAAA 120 ANSYYVPDTT PATTNVSFFS PSSSSPLSSP SMSSDQFDDE SADVPLVAPS HDDQPLDTDY 180 GFRTNGVMST AAPCWFDHHF NTTNFDGSCF ESPKCADLQM FNTTADADAA SLFNPPAFMD 240 YEQDYFYEEE VDIPLWSFC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 1e-30 | ERF family protein |