PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0483.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 417aa    MW: 47240.7 Da    PI: 6.5116
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0483.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.91.8e-201261882586
             trihelix  25 klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                           +kk++W+++sk+m+ergf +sp+qC++k+++lnkryk+++++ +++ +++++++  ++d ++
  Kaladp0045s0483.3.p 126 MQKKGKWKSISKVMAERGFYVSPQQCEDKFNDLNKRYKRLNDILGRGtSCQVVEKPELLDMMD 188
                          39*********************************************6699999999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MEGNLNMVPG GGSYGGGLDQ QGSMRYNHHH RPSSHAVTDN DLRQGPALHP SIHDVFPPFT  60
VGTMQDCGDR SLSLADYNKA ERARNVTSDD DEPGVMEDAG NCHNGGQDAS SGYRGGGGGR  120
MKFALMQKKG KWKSISKVMA ERGFYVSPQQ CEDKFNDLNK RYKRLNDILG RGTSCQVVEK  180
PELLDMMDHL SEKSKEDVRK ILSSKHLFYE EMCSYHNGNR LHLPHDPALQ RALHLALESR  240
EMSEISDGRR KSVDDYDEDD HGGESDDCDE FEECHVAHGD SRALCGVMEG SSAKRTKQDL  300
SHDEFSFGNA QEGCKISQLN TQNVHIAMNQ AYPEGSKSAW YNSQMMQSRS LKLEEKRTKI  360
QMEMLELEKQ RLKWQRFSKK KDRELEKMRL ENERMKLENE SMALELKRRE IGLKGD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-117Trihelix family protein