PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0045s0483.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 447aa MW: 50572.6 Da PI: 6.9261

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0045s0483.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.3	6.4e-26	119	218	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsess 76 +W++q+v++Li+a+++++++ ++g +kk++W+++sk+m+ergf +sp+qC++k+++lnkryk+++++ +++ +++++ Kaladp0045s0483.2.p 119 KWSDQMVKLLITAVSYVGQDASSGYrgggggrmkfalmQKKGKWKSISKVMAERGFYVSPQQCEDKFNDLNKRYKRLNDILGRGtSCQVV 208 7*****************998755566777888888********************************************669999 PP trihelix 77 stcpyfdqle 86 ++ ++d ++ Kaladp0045s0483.2.p 209 EKPELLDMMD 218 9999999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEGNLNMVPG GGSYGGGLDQ QGSMRYNHHH RPSSHAVTDN DLRQGPALHP SIHDVFPPFT 60 VGTMQDCGDR SLSLADYNKA ERARNVTSDD DEPGVMEDAG NCHNGGGKGA KGSFWHRVKW 120 SDQMVKLLIT AVSYVGQDAS SGYRGGGGGR MKFALMQKKG KWKSISKVMA ERGFYVSPQQ 180 CEDKFNDLNK RYKRLNDILG RGTSCQVVEK PELLDMMDHL SEKSKEDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPHDPALQ RALHLALESR EMSEISDGRR KSVDDYDEDD HGGESDDCDE 300 FEECHVAHGD SRALCGVMEG SSAKRTKQDL SHDEFSFGNA QEGCKISQLN TQNVHIAMNQ 360 AYPEGSKSAW YNSQMMQSRS LKLEEKRTKI QMEMLELEKQ RLKWQRFSKK KDRELEKMRL 420 ENERMKLENE SMALELKRRE IGLKGD*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEGNLNMVPG GGSYGGGLDQ QGSMRYNHHH RPSSHAVTDN DLRQGPALHP SIHDVFPPFT  60
VGTMQDCGDR SLSLADYNKA ERARNVTSDD DEPGVMEDAG NCHNGGGKGA KGSFWHRVKW  120
SDQMVKLLIT AVSYVGQDAS SGYRGGGGGR MKFALMQKKG KWKSISKVMA ERGFYVSPQQ  180
CEDKFNDLNK RYKRLNDILG RGTSCQVVEK PELLDMMDHL SEKSKEDVRK ILSSKHLFYE  240
EMCSYHNGNR LHLPHDPALQ RALHLALESR EMSEISDGRR KSVDDYDEDD HGGESDDCDE  300
FEECHVAHGD SRALCGVMEG SSAKRTKQDL SHDEFSFGNA QEGCKISQLN TQNVHIAMNQ  360
AYPEGSKSAW YNSQMMQSRS LKLEEKRTKI QMEMLELEKQ RLKWQRFSKK KDRELEKMRL  420
ENERMKLENE SMALELKRRE IGLKGD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-138	Trihelix family protein