PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0045s0483.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 447aa MW: 50572.6 Da PI: 6.9261 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 82.3 | 6.4e-26 | 119 | 218 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsess 76 +W++q+v++Li+a+++++++ ++g +kk++W+++sk+m+ergf +sp+qC++k+++lnkryk+++++ +++ +++++ Kaladp0045s0483.1.p 119 KWSDQMVKLLITAVSYVGQDASSGYrgggggrmkfalmQKKGKWKSISKVMAERGFYVSPQQCEDKFNDLNKRYKRLNDILGRGtSCQVV 208 7*******************998755566777888888**********************************************669999 PP trihelix 77 stcpyfdqle 86 ++ ++d ++ Kaladp0045s0483.1.p 209 EKPELLDMMD 218 9999999997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 447 aa Download sequence |
MEGNLNMVPG GGSYGGGLDQ QGSMRYNHHH RPSSHAVTDN DLRQGPALHP SIHDVFPPFT 60 VGTMQDCGDR SLSLADYNKA ERARNVTSDD DEPGVMEDAG NCHNGGGKGA KGSFWHRVKW 120 SDQMVKLLIT AVSYVGQDAS SGYRGGGGGR MKFALMQKKG KWKSISKVMA ERGFYVSPQQ 180 CEDKFNDLNK RYKRLNDILG RGTSCQVVEK PELLDMMDHL SEKSKEDVRK ILSSKHLFYE 240 EMCSYHNGNR LHLPHDPALQ RALHLALESR EMSEISDGRR KSVDDYDEDD HGGESDDCDE 300 FEECHVAHGD SRALCGVMEG SSAKRTKQDL SHDEFSFGNA QEGCKISQLN TQNVHIAMNQ 360 AYPEGSKSAW YNSQMMQSRS LKLEEKRTKI QMEMLELEKQ RLKWQRFSKK KDRELEKMRL 420 ENERMKLENE SMALELKRRE IGLKGD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G21200.1 | 1e-138 | Trihelix family protein |