PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0036.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ZF-HD
Protein Properties Length: 312aa    MW: 33812.4 Da    PI: 6.7069
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0036.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer94.58.5e-3091144357
          ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                          +  Y+eClkNhA+++ gha+DGC+Efmp+ g eg+ +alkCaACgCHRnFHR+e+
  Kaladp0045s0036.1.p  91 RPIYRECLKNHAINVMGHALDGCCEFMPA-GPEGSLDALKCAACGCHRNFHRKEE 144
                          568*************************9.999********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEFDDHHRHP HHHRHQRSEE EEDDEEEEEE ASDEMLMMNS SLNTNTNHNT VTSGGGGGGG  60
NNVSLSRARM VEALSQVQIQ PAPAVTAPSS RPIYRECLKN HAINVMGHAL DGCCEFMPAG  120
PEGSLDALKC AACGCHRNFH RKEEAVGGEP GAMLYSLSHP HLAHPGPGGF GSYYPHPAPP  180
GYLHLAPPRP LALPSSSGGG AAGGSQDDDV SNPNAIVAAG GSSNGKKRFR TKFTLEQKEK  240
MLAMAERIGW RIQRAEEELV QQFCQEAAVK RHVFKVWMHN NKHTLGRAAT TSNNHNNNNN  300
GGSSRQQQLM D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.15e-62ZF-HD family protein