PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0032.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 292aa    MW: 32512.2 Da    PI: 4.5264
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0032.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-1859112356
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV +WFqNrRa++k
  Kaladp0045s0032.1.p  59 KKRRLSLHQVKALEQSFEVENKLEPERKVRLAQELGLQPRQVAIWFQNRRARWK 112
                          5668999**********************************************9 PP
2HD-ZIP_I/II129.41.5e-4158150193
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          ekkrrls +qvk+LE+sFe e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlE+dy +Lk++yd+lk   ++L++++++L+++
  Kaladp0045s0032.1.p  58 EKKRRLSLHQVKALEQSFEVENKLEPERKVRLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNYDSLKLGFDALQRDKDSLHKQ 147
                          69***************************************************************************************9 PP

          HD-ZIP_I/II  91 lke 93 
                          +++
  Kaladp0045s0032.1.p 148 IRD 150
                          986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MKRPRNSDSL GAALMSVSPD SDGLDQALVY SRELQSMLEG FDSDGCVEES CGGGQMSEKK  60
RRLSLHQVKA LEQSFEVENK LEPERKVRLA QELGLQPRQV AIWFQNRRAR WKTKQLERDY  120
GVLKSNYDSL KLGFDALQRD KDSLHKQIRD LKSKLNQETP DQSNNLLIED DGDDTELIIA  180
EPPQNAILND ISSVVSFSTD FKEGFTPTTT ATSSADSGFS AILNDSKGSP NGAVSSALLQ  240
SAILTASSCS GYHPELVKME ERSLFMVEES CDFFSEEQAP TLHWYCPDQW T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107115RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.16e-68HD-ZIP family protein