PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0043s0224.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 534aa MW: 60236 Da PI: 6.8869

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0043s0224.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	90.1	2.5e-28	65	147	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ e+laLi++r+em+ ++r++ +k+plW++vs+k+++ gf+rs+k+Ckek+en+ k+y+++ke+ ++ ++ +t++yf+qle Kaladp0043s0224.1.p 65 RWPRAETLALIKVRSEMDAAFRESGAKGPLWDDVSRKLAALGFSRSSKKCKEKFENIYKYYRRTKESGQR---PNGKTYRYFEQLE 147 8****************************************************************998...45668****97 PP
2	trihelix	104.4	8e-33	363	447	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev aLi +r+ + ++++++ k+plWee+s++m++rg+ rs+k+Ckekwen+nk++k++++++kkr +e+s+tcpyf+ l+ Kaladp0043s0224.1.p 363 RWPRAEVEALISVRSTFDLQYQENSPKGPLWEEISAAMQRRGYDRSAKRCKEKWENINKYFKRVRDSNKKR-PEDSRTCPYFHLLD 447 8*******************************************************************8.99*******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MLGASSFTTT PAAAQGLLVV HGTASGKDLN AKGGGVDSQG AVGAFQDDER GRELEENDRN 60 FAGNRWPRAE TLALIKVRSE MDAAFRESGA KGPLWDDVSR KLAALGFSRS SKKCKEKFEN 120 IYKYYRRTKE SGQRPNGKTY RYFEQLEVID RQPSPLTAIL PSATDQLENA DRSSWIRATA 180 MAINVDPLSV CVNAGVDCPM QNAADNGGNG GNNVTNSSTW TNSTSKESEG MGRKAKKKRK 240 FSEFFDRLMT EVTMKQEELQ RRFAEAIERY EVDRIKREEA WRVQETARIR REHEMLAHER 300 SIAAAKDAAV IAILQKFLQQ EIPVHFTDDI PITVAPKEKS PEEQAKESYK ADSVLQNSYS 360 SSRWPRAEVE ALISVRSTFD LQYQENSPKG PLWEEISAAM QRRGYDRSAK RCKEKWENIN 420 KYFKRVRDSN KKRPEDSRTC PYFHLLDSLY KQKAGNSNPR LDGTASGQNN LMAPQSSYEM 480 EQQQNELARM VGSNMDPNPT PDESEEEQGI EDRENYQVVA NNSHPSMEEG HNL*

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MLGASSFTTT PAAAQGLLVV HGTASGKDLN AKGGGVDSQG AVGAFQDDER GRELEENDRN  60
FAGNRWPRAE TLALIKVRSE MDAAFRESGA KGPLWDDVSR KLAALGFSRS SKKCKEKFEN  120
IYKYYRRTKE SGQRPNGKTY RYFEQLEVID RQPSPLTAIL PSATDQLENA DRSSWIRATA  180
MAINVDPLSV CVNAGVDCPM QNAADNGGNG GNNVTNSSTW TNSTSKESEG MGRKAKKKRK  240
FSEFFDRLMT EVTMKQEELQ RRFAEAIERY EVDRIKREEA WRVQETARIR REHEMLAHER  300
SIAAAKDAAV IAILQKFLQQ EIPVHFTDDI PITVAPKEKS PEEQAKESYK ADSVLQNSYS  360
SSRWPRAEVE ALISVRSTFD LQYQENSPKG PLWEEISAAM QRRGYDRSAK RCKEKWENIN  420
KYFKRVRDSN KKRPEDSRTC PYFHLLDSLY KQKAGNSNPR LDGTASGQNN LMAPQSSYEM  480
EQQQNELARM VGSNMDPNPT PDESEEEQGI EDRENYQVVA NNSHPSMEEG HNL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-101	Trihelix family protein