PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0043s0139.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 320aa MW: 35339.7 Da PI: 10.013 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 86.9 | 2.1e-27 | 42 | 96 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++ +keClkNhAa lGgha+DGCgEfmp+ e + +kC ACgCHRnFHR+ ++ Kaladp0043s0139.1.p 42 EMIFKECLKNHAAGLGGHALDGCGEFMPA--ERVGPGLMKCEACGCHRNFHRQAMAA 96 689*************************9..4456999**************98765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 320 aa Download sequence |
MKPNQMLEIG PGPATNQQLV AQTVSYAYQP VSPPHAAEVT AEMIFKECLK NHAAGLGGHA 60 LDGCGEFMPA ERVGPGLMKC EACGCHRNFH RQAMAAQSHH REPPRSVVGV TPPHFSFMPR 120 RCSSSPSTST SPHLSQPRQL NPPPQPPPMA VRYLHHHSFG AHMLMPLSTG KSASPPPSTA 180 RIKPSDHHQT RRQQNPNPST RRKRFRSKFS SEQKHRMRRF AEGLNWKIRK HDDTLVARFC 240 ADVGVSRGVL KVWMHNNKHT AGQIVPDNPT GSSSGNNGED EQLQLSNSEH RQQVDEGDDG 300 LGLGVDHHQR HNHPLNTLD* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 213 | 219 | QKHRMRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69600.1 | 3e-28 | ZF-HD family protein |