PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0108.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 293aa MW: 30281.9 Da PI: 6.9865

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0108.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	131	153	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC Cgk F + L H +H Kaladp0042s0108.1.p 131 YKCAVCGKEFGSYQALGGHKASH 153 9*********9999998888777 PP
2	zf-C2H2	13.1	0.00028	184	206	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F++ L H r+H Kaladp0042s0108.1.p 184 HECGICHKQFPTGQALGGHKRRH 206 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MATEALSHHP PGLSEAEDLG CKNKQAGSLL DGGFAKRKRS KRPRCEGGGG GGEEELVGAL 60 SEADMDLARS LMMLANGVVE EERVGEVKVG GGGEPDGGCL GAKESVSMED VSVPPLLTVA 120 ETGSAVKTES YKCAVCGKEF GSYQALGGHK ASHRKLFADN IETAAATAVM TAAGGGATGG 180 GRVHECGICH KQFPTGQALG GHKRRHYEGT LGKQSHQSHN HKTAASSSGV TTATTSDGAG 240 SSLSHRGFDL NIPALPDLWP VSRFAAVEEE VESPHPAKKP RVFSPNYVQI RI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	2e-30	C2H2 family protein