PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0681.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 154aa MW: 17931.4 Da PI: 10.3614 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.6 | 9.9e-11 | 49 | 89 | 4 | 51 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 + V++ k+ +W A I++ +k+++lg+ gt eeAa ++++a+ Kaladp0040s0681.4.p 49 RVVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 89 77887..47*********4.....5********************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MKDDFRPSLN HLSASSLTKE QPAPPISEFK RRKRHKRKQI QDQETCLMRV VYFKNMKWQA 60 AIKVDKKQIH LGTVGTQEEA AHLYDRAAYM CGREPNFELS EVEKQELKQL NWDEFLEITR 120 STITSKKHQR RGIVSSRRRS VLSSQHSSSM DGE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 39 | RRKRHKRKQ |
2 | 32 | 40 | RRKRHKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 3e-44 | ERF family protein |