PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0160.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 456aa MW: 50071.4 Da PI: 8.352

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0160.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.8	2.1e-40	172	249	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls keyhr+h++Ce hsk p+v+v gle+rfCqqCsrfh+lsefDe+krsCr+rL++hn+rrrk+++ Kaladp0040s0160.1.p 172 RCQVEGCNLDLSGSKEYHRKHRICESHSKYPKVTVGGLERRFCQQCSRFHDLSEFDEKKRSCRKRLSDHNARRRKPRS 249 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MWDTRSSLQF DWENLVLLDT KGVEVPSKLN SSVWGNDQDG AERHSHTCDF RSISGIFGSD 60 AAHVSSISSK STSVDSPSLG KTSIISAFNE SRLTSIAVEF AKPKETAASS MSLEASVGSV 120 EPMIGLKLGK RTYFEDFCSG SHAKILSVSD KPLSSESTRR SRSSHQTMQS LRCQVEGCNL 180 DLSGSKEYHR KHRICESHSK YPKVTVGGLE RRFCQQCSRF HDLSEFDEKK RSCRKRLSDH 240 NARRRKPRSE TSRFNLDGRL QVGFFLNTST YLQARPALSP WDTCGSKFTL TRDYSPSSKS 300 RAAGSDHHQY LLGNGISNTV SMLSYSNDGS PTKSSTFEVL DYGVEECTAP ANRVAAQDPR 360 SALSLLSSNG SGSCNSDPVP VYHQPNNNVL QQQSVIHGVL QSASLVSPQP WGIGQRPSDS 420 PTPLADYLSS DSYHLSQYKL WNGNFGPGFG DNQLH*

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MWDTRSSLQF DWENLVLLDT KGVEVPSKLN SSVWGNDQDG AERHSHTCDF RSISGIFGSD  60
AAHVSSISSK STSVDSPSLG KTSIISAFNE SRLTSIAVEF AKPKETAASS MSLEASVGSV  120
EPMIGLKLGK RTYFEDFCSG SHAKILSVSD KPLSSESTRR SRSSHQTMQS LRCQVEGCNL  180
DLSGSKEYHR KHRICESHSK YPKVTVGGLE RRFCQQCSRF HDLSEFDEKK RSCRKRLSDH  240
NARRRKPRSE TSRFNLDGRL QVGFFLNTST YLQARPALSP WDTCGSKFTL TRDYSPSSKS  300
RAAGSDHHQY LLGNGISNTV SMLSYSNDGS PTKSSTFEVL DYGVEECTAP ANRVAAQDPR  360
SALSLLSSNG SGSCNSDPVP VYHQPNNNVL QQQSVIHGVL QSASLVSPQP WGIGQRPSDS  420
PTPLADYLSS DSYHLSQYKL WNGNFGPGFG DNQLH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	246	KKRSCRKRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-59	SBP family protein