PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0699.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 841aa    MW: 91753.8 Da    PI: 6.5073
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0699.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-182683457
                         -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                           ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Kaladp0039s0699.2.p 26 YVRYTAEQVEALERVYAECPKPSSLRRQQLVRECpilaNIEPKQIKVWFQNRRCREKQ 83
                         5789****************************************************97 PP
2START146.52.5e-461643692204
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s++++  a+ra+g+v  +++   +e+l+d++ W +++++ e+   + ++  g
  Kaladp0039s0699.2.p 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSSNAVAARACGLVGLEPP-KIAEILKDRPSWFRDCRSLEVFTSLPTAngG 252
                          68999*****************************************************.7777777777***************99999* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                           ++l ++++ a++ l+p Rd +++Ry+  l+ g++v++++S++ +   p+   ++vRae+lpSg+li+++++g+s +++v+h +l+ +++
  Kaladp0039s0699.2.p 253 SIELVYTQMFAPTILAPaRDLWTLRYTTLLENGSLVVCERSLSGTGTAPNaGGNFVRAEMLPSGYLIRSCDGGGSIIHIVDHLNLEPWSV 342
                          *******************************************9999998899************************************* PP

                          HHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                START 178 hwllrslvksglaegaktwvatlqrqc 204
                          +++lr+l+ s+    +k++ a+l++ +
  Kaladp0039s0699.2.p 343 PEVLRPLYTSSKLVDQKMTIAALHYVR 369
                          ***********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 841 aa     Download sequence    
MAMVVSQRRE NSSGSISKHL DATGKYVRYT AEQVEALERV YAECPKPSSL RRQQLVRECP  60
ILANIEPKQI KVWFQNRRCR EKQRNESSRL QAVNRKLTAM NKLLMEENDR LQKQVSHLVY  120
ENGYMRQQLQ SATGAAADGS CESVVTTPRQ SLRDATNPAG LLAIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFA ISQSSNAVAA RACGLVGLEP PKIAEILKDR PSWFRDCRSL  240
EVFTSLPTAN GGSIELVYTQ MFAPTILAPA RDLWTLRYTT LLENGSLVVC ERSLSGTGTA  300
PNAGGNFVRA EMLPSGYLIR SCDGGGSIIH IVDHLNLEPW SVPEVLRPLY TSSKLVDQKM  360
TIAALHYVRQ VAHETSGEVI YGFGRQPAVL RTFSQRLSRG FNDAINGFSD AGWSVMNCDG  420
ADDVIISVNP TKNLNSQCSS ASSFQTVGGI LCAKASMLLR NVPPAVLVRF LREHRSEWAD  480
YNVDAYMAAS VKSNSLTFPG MRPMSFSGSQ IMMPLGHTIE NEEMLEVVRI EGQSLSPEDG  540
YLSRDIHLLQ ICGGTAENSM GACAELVFAP ISEMFPDDVP LLPSGFRIIP LDSKSADIQD  600
QLKGHRTLDL TSSLEVSPVT SQAPGGTPAQ ETRSVLTIAF QFPFESHLQD SIATMARQYV  660
RSVITSVQRV ATAITPTGIS PGAGPKISPD SPEALTLAQW ICHSYSYQIG ADLLRAESLA  720
GDLVLKSLWH HPDAILCCSI KATPVLIFAN KAGLDMLETT LAALQDVSLD KIFDESGRKA  780
LCSDFAKIMQ QGFAYLPSGI CMSTMGRHIS YNQSVAWKVL AGDDQTVHCL AFSFVNWSFM  840
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein