PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0692.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 421aa MW: 46450.3 Da PI: 8.3696

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0692.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.4	1.3e-06	256	277	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C Cgk F+r nL+ H+r H Kaladp0039s0692.1.p 256 FCRVCGKGFKRDANLRMHMRAH 277 6*******************99 PP
2	zf-C2H2	11.5	0.00093	356	379	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y C+ Cg k Fs s+L++H + + Kaladp0039s0692.1.p 356 YACKRCGqKQFSVLSDLRTHEKHC 379 89******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MAPTSSSCFL PNEPASSSQP MLGYGVMTSN GGHEDVESSN PVGLNHFSTS LLCSISILKE 60 RVRQAQSLVV SLFASPSITD QHYSQQVVEP ASMTMARISS LVQDIVAVST SMMLTCQQMS 120 LSNPTRQHFQ ASSDHHHPSP ISGHRHNQTL IRDGDGNNHV IIQAGQDVGH QAAHKQEQIL 180 GHRDMFGIGS SEQDMEWFGG SSCSFANATL SYDTATTSTT NSIQQESNNT EHHQLSHPDL 240 IIEMDAADLL AKYTHFCRVC GKGFKRDANL RMHMRAHGDE YKSIAALANP AKINNDDPNI 300 PATTPCTADK TARRSIRYSC PHHGCRWNRK HPKFQPLKSM ICAKNHYKRS HCPKMYACKR 360 CGQKQFSVLS DLRTHEKHCG ESKWRCSCGT TFSRKDKLLG HVGLFAGHVP VIVNHVLSHT 420 *

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MAPTSSSCFL PNEPASSSQP MLGYGVMTSN GGHEDVESSN PVGLNHFSTS LLCSISILKE  60
RVRQAQSLVV SLFASPSITD QHYSQQVVEP ASMTMARISS LVQDIVAVST SMMLTCQQMS  120
LSNPTRQHFQ ASSDHHHPSP ISGHRHNQTL IRDGDGNNHV IIQAGQDVGH QAAHKQEQIL  180
GHRDMFGIGS SEQDMEWFGG SSCSFANATL SYDTATTSTT NSIQQESNNT EHHQLSHPDL  240
IIEMDAADLL AKYTHFCRVC GKGFKRDANL RMHMRAHGDE YKSIAALANP AKINNDDPNI  300
PATTPCTADK TARRSIRYSC PHHGCRWNRK HPKFQPLKSM ICAKNHYKRS HCPKMYACKR  360
CGQKQFSVLS DLRTHEKHCG ESKWRCSCGT TFSRKDKLLG HVGLFAGHVP VIVNHVLSHT  420
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	2e-94	C2H2 family protein