PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0452.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 955aa MW: 105266 Da PI: 5.4845

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0452.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	7.9e-29	602	652	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Kaladp0039s0452.3.p 602 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 652 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MEPSRFKDKG VEYFPSLRLS NENVNDGIQS VVMDDVFSGM CEITNFDSYT GWGSTPVPDQ 60 IYAPYEFVSS LHPTPASYQP FDALNFSEQN IICITPTNGS AGPSSVVVSP FGSEDKLLSN 120 QTGNGQFQCN LASSDENDYG IEPAPIATRS SCHSSNERYL IEKPLGQSLD EKMLRVLSLF 180 KESSGAGILA QVWVPVKHGD HFILTTSDQP YLLDNMLAGY REVSRGYTFS TREAPGSFPG 240 LPGRVFISKV PEWTSNVIYY NTTEYLRVKH AVDHEVRGSI AFPVFNPSEN SCCAVLELVT 300 VKEKPNFDLE MKTVCEALET VSLKTTAPPR LHSQSLSKNQ RDALAEIADV LRTVCHAHRL 360 PLALTWIPCS YTEGLREEFI RLHVEANTER RGKQILCIEE SACFANDKSM EGFVQACCEN 420 YLEGKQGVAG KALQSNQPFF LPDVKCYDIS EYPLVQHARK FGLSAAVAIR LRSTFTDVDD 480 YILELFLPVT MTGSYEQQLL LNSLSSTMQK VCKTLRTVSD AELAETGNSK LLRDGICQEF 540 EHTANPGMSS QLSSSTSDTS SFHKLPTDTS KSCIGKREFE DCWQEDVNAQ GRHFEKKRST 600 VEKSVSLSVL QQYFSGSLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIN KVNRSLRKLQ 660 TVLDSVQGVE GGLKFDPTTG GLVPARSLVQ DLDKGQILHH GLACNFAAQE MVSTAPSIEL 720 LAIKLEENDC GMGGSHLRAV QNISFKNTGQ GALHKSSFPS ESFSDDAKSS GMDVMANCSL 780 SKQVPRVESL ESHFLSQNSS SMIDEGNNEH NQPASSSMTD SSNGSLLNGS SSTSQSHEDT 840 YIRKKVSRGN TGSKITVKAT FKEDTIRFKF DPFAGCFQLY EEVATRFKLQ VGTFKLKYLD 900 DEDELVVLES ELDWQECLEV IESVSSPSVK FTVLEIPCGM GSSGSSNCFL MRGT*

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MEPSRFKDKG VEYFPSLRLS NENVNDGIQS VVMDDVFSGM CEITNFDSYT GWGSTPVPDQ  60
IYAPYEFVSS LHPTPASYQP FDALNFSEQN IICITPTNGS AGPSSVVVSP FGSEDKLLSN  120
QTGNGQFQCN LASSDENDYG IEPAPIATRS SCHSSNERYL IEKPLGQSLD EKMLRVLSLF  180
KESSGAGILA QVWVPVKHGD HFILTTSDQP YLLDNMLAGY REVSRGYTFS TREAPGSFPG  240
LPGRVFISKV PEWTSNVIYY NTTEYLRVKH AVDHEVRGSI AFPVFNPSEN SCCAVLELVT  300
VKEKPNFDLE MKTVCEALET VSLKTTAPPR LHSQSLSKNQ RDALAEIADV LRTVCHAHRL  360
PLALTWIPCS YTEGLREEFI RLHVEANTER RGKQILCIEE SACFANDKSM EGFVQACCEN  420
YLEGKQGVAG KALQSNQPFF LPDVKCYDIS EYPLVQHARK FGLSAAVAIR LRSTFTDVDD  480
YILELFLPVT MTGSYEQQLL LNSLSSTMQK VCKTLRTVSD AELAETGNSK LLRDGICQEF  540
EHTANPGMSS QLSSSTSDTS SFHKLPTDTS KSCIGKREFE DCWQEDVNAQ GRHFEKKRST  600
VEKSVSLSVL QQYFSGSLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIN KVNRSLRKLQ  660
TVLDSVQGVE GGLKFDPTTG GLVPARSLVQ DLDKGQILHH GLACNFAAQE MVSTAPSIEL  720
LAIKLEENDC GMGGSHLRAV QNISFKNTGQ GALHKSSFPS ESFSDDAKSS GMDVMANCSL  780
SKQVPRVESL ESHFLSQNSS SMIDEGNNEH NQPASSSMTD SSNGSLLNGS SSTSQSHEDT  840
YIRKKVSRGN TGSKITVKAT FKEDTIRFKF DPFAGCFQLY EEVATRFKLQ VGTFKLKYLD  900
DEDELVVLES ELDWQECLEV IESVSSPSVK FTVLEIPCGM GSSGSSNCFL MRGT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein