PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0038s0031.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 275aa    MW: 30550.7 Da    PI: 9.3086
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0038s0031.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.16.3e-18128182256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++k+q   Le+ F+ +++++ +++e LA++l+L  rqV vWFqNrRa+ k
  Kaladp0038s0031.1.p 128 RKKLRLNKHQSALLEDSFKLQSTLNPKQKEALARQLNLRPRQVEVWFQNRRARTK 182
                          788899***********************************************98 PP
2HD-ZIP_I/II1185.2e-38128217190
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl+k+q++lLE+sF+ +++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+eenerL+ke ++L+++
  Kaladp0038s0031.1.p 128 RKKLRLNKHQSALLEDSFKLQSTLNPKQKEALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEVLKKCCERLTEENERLHKELKALKQA 217
                          69*************************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSPPPLPLDH LIISNKDRGG GLFLGLALRT TAAVATTPPA LDLSLSSSSS GHKPNNIISY  60
DQPSLTLSLL LPAKKFDAQS STGDDEISSF SNNSVSVKRE REEEPDDQLD ASGANIDLFD  120
DVSNTSSRKK LRLNKHQSAL LEDSFKLQST LNPKQKEALA RQLNLRPRQV EVWFQNRRAR  180
TKLKQTEVDC EVLKKCCERL TEENERLHKE LKALKQASRQ QQPFYMRLPP TMCPSCDTLT  240
DAPSSKNSLP NMLTSSKKRM IFNPFVTKQP SAAC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127133SRKKLRL
2177185RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.12e-62HD-ZIP family protein