PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0272.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 435aa MW: 49152.5 Da PI: 6.0429

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0272.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.4	2.9e-21	115	211	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessst 78 +Wt++ v++Li a+ ++++ + + +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++e+ +++ +++++++ Kaladp0037s0272.1.p 115 KWTDNVVRLLISAVACVGDDGSLDGveglrrksgilQKKGKWKTVSKIMISKGCSVSPQQCEDKFNDLNKRYKRLNEILGRGtSCRVVEN 204 7************777777754334445556788********************************************66999999 PP trihelix 79 cpyfdql 85 ++ d++ Kaladp0037s0272.1.p 205 PALMDSM 211 9888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MDNSGLGCGF LSGLNGVMLD LESPINKNQQ VQMDPSLMNH QHHVDKISGL GLGHHSMGLF 60 ESRNCNSNGI SMNFGKGKAI AVTSNENTSD DDEDLDGDNC HGPNEKRRSP WHRMKWTDNV 120 VRLLISAVAC VGDDGSLDGV EGLRRKSGIL QKKGKWKTVS KIMISKGCSV SPQQCEDKFN 180 DLNKRYKRLN EILGRGTSCR VVENPALMDS MPNLSSKMKD VVRKILCSKH LFYQEMCAYH 240 NGQRIPNCHD LDLQGLSVPL ARSTLDHHGP EEEEPDEDDD PDDNDLDNND HDIAADDSAR 300 VRKKKSPNED NDNLLSHSGA LEEIEAEMAA IVEDPTKTLV DKRECIKKRM LLLLEHRVNI 360 QAEALEIESR HFKWLRYRHK KDGEFMKLKL ENERQKLEYE RMELLIHEKQ LELESKKPQE 420 GEACVGLEIL SVRK*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MDNSGLGCGF LSGLNGVMLD LESPINKNQQ VQMDPSLMNH QHHVDKISGL GLGHHSMGLF  60
ESRNCNSNGI SMNFGKGKAI AVTSNENTSD DDEDLDGDNC HGPNEKRRSP WHRMKWTDNV  120
VRLLISAVAC VGDDGSLDGV EGLRRKSGIL QKKGKWKTVS KIMISKGCSV SPQQCEDKFN  180
DLNKRYKRLN EILGRGTSCR VVENPALMDS MPNLSSKMKD VVRKILCSKH LFYQEMCAYH  240
NGQRIPNCHD LDLQGLSVPL ARSTLDHHGP EEEEPDEDDD PDDNDLDNND HDIAADDSAR  300
VRKKKSPNED NDNLLSHSGA LEEIEAEMAA IVEDPTKTLV DKRECIKKRM LLLLEHRVNI  360
QAEALEIESR HFKWLRYRHK KDGEFMKLKL ENERQKLEYE RMELLIHEKQ LELESKKPQE  420
GEACVGLEIL SVRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	4e-62	Trihelix family protein