PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0036s0258.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 292aa    MW: 32482.9 Da    PI: 8.7685
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0036s0258.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.2e-074083344
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                         +W++eE + + +a + +  +   +W ++a++++ g+t  +++  +
  Kaladp0036s0258.1.p 40 KWSQEENKMFENALAVYDRDspdRWQKVAAMIP-GKTVGDVVKQY 83
                         8*****************99*************.***99998877 PP
2Myb_DNA-binding44.82.9e-14149193347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  Kaladp0036s0258.1.p 149 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 193
                          8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MKFEMEIRSP GYGYPENNQQ QNSRQNRKQQ HHQQAESLSK WSQEENKMFE NALAVYDRDS  60
PDRWQKVAAM IPGKTVGDVV KQYEDLEADV SSIEAGLVPV PGYACPAFTL DWVGGDGGGG  120
SKSYDGFSYG YGGGKRLRGV EQERKKGVPW TEEEHKLFLL GLKKYGKGDW RNISRNFVIT  180
RTPTQVASHA QKYFIRQLSG GKEKRRASIH DITTVNLSES QTPLSPDQSA RGQHSPEMPF  240
QWGGSQSSSG HGSSIDFNGV YGFSSNRSAQ GMLGSYMDAY QMQSATQYPQ V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-78MYB_related family protein