PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0173.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 556aa MW: 60536.4 Da PI: 8.6587

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0173.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	38	60	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0036s0173.3.p 38 FICEVCNKGFQREQNLQLHRRGH 60 89*******************88 PP
2	zf-C2H2	12	0.00067	115	137	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ Kaladp0036s0173.3.p 115 WKCDKCSKKYAVQSDWKAHSKTC 137 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MATISDAPST QKKKRTQPDP DAEVIALSPK TLMATNRFIC EVCNKGFQRE QNLQLHRRGH 60 SLPWKLKQKS SKEVARKKVY LCPEPSCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC 120 SKKYAVQSDW KAHSKTCGTK EYRCDCGTLF SRRDSFMTHR AFCEALAQEN AMNPTNLSAI 180 TSQLFGHSLV AANQISPHHQ ELNFHKHSMQ HSDNLPAARS NGDGFRPFGS LLPPLNGSAF 240 RPISTDIVFG SSSYHQDDQD HHSPNKVFMT GMMQQLPQDQ IPSDQTDHSF FSNIASKNDS 300 ENPTNNDSIS ISHLSSSNLF ANRFSTSGGI GGSFNSAQGP TSGLFSGNTI MGDQISPSLY 360 SSAVSLQNSN NASASAHLSA TALLQKAAQV GSSCSINGSS ALLRSLGSSL SGPSSKLDLQ 420 ASPRAIDFKA LLGDKDDKNL HEMISSLGGG GSTTTSSMFG SLAKGLTGYN DEHQENSNSL 480 CSTKLSFGKL LEEEYSKEQP QNVFNDTLTR DFLGVGQIVR QLSGGFSQYD MMQLQQGHQV 540 SSKTSIREGR EFGRD*

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MATISDAPST QKKKRTQPDP DAEVIALSPK TLMATNRFIC EVCNKGFQRE QNLQLHRRGH  60
SLPWKLKQKS SKEVARKKVY LCPEPSCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC  120
SKKYAVQSDW KAHSKTCGTK EYRCDCGTLF SRRDSFMTHR AFCEALAQEN AMNPTNLSAI  180
TSQLFGHSLV AANQISPHHQ ELNFHKHSMQ HSDNLPAARS NGDGFRPFGS LLPPLNGSAF  240
RPISTDIVFG SSSYHQDDQD HHSPNKVFMT GMMQQLPQDQ IPSDQTDHSF FSNIASKNDS  300
ENPTNNDSIS ISHLSSSNLF ANRFSTSGGI GGSFNSAQGP TSGLFSGNTI MGDQISPSLY  360
SSAVSLQNSN NASASAHLSA TALLQKAAQV GSSCSINGSS ALLRSLGSSL SGPSSKLDLQ  420
ASPRAIDFKA LLGDKDDKNL HEMISSLGGG GSTTTSSMFG SLAKGLTGYN DEHQENSNSL  480
CSTKLSFGKL LEEEYSKEQP QNVFNDTLTR DFLGVGQIVR QLSGGFSQYD MMQLQQGHQV  540
SSKTSIREGR EFGRD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	78	KLKQKSSKEVARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-96	C2H2 family protein