PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0173.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 524aa MW: 57115.5 Da PI: 8.5486

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0173.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.6e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H Kaladp0036s0173.2.p 6 FICEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	12	0.00062	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ Kaladp0036s0173.2.p 83 WKCDKCSKKYAVQSDWKAHSKTC 105 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MATNRFICEV CNKGFQREQN LQLHRRGHSL PWKLKQKSSK EVARKKVYLC PEPSCVHHDP 60 ARALGDLTGI KKHFSRKHGE KKWKCDKCSK KYAVQSDWKA HSKTCGTKEY RCDCGTLFSR 120 RDSFMTHRAF CEALAQENAM NPTNLSAITS QLFGHSLVAA NQISPHHQEL NFHKHSMQHS 180 DNLPAARSNG DGFRPFGSLL PPLNGSAFRP ISTDIVFGSS SYHQDDQDHH SPNKVFMTGM 240 MQQLPQDQIP SDQTDHSFFS NIASKNDSEN PTNNDSISIS HLSSSNLFAN RFSTSGGIGG 300 SFNSAQGPTS GLFSGNTIMG DQISPSLYSS AVSLQNSNNA SASAHLSATA LLQKAAQVGS 360 SCSINGSSAL LRSLGSSLSG PSSKLDLQAS PRAIDFKALL GDKDDKNLHE MISSLGGGGS 420 TTTSSMFGSL AKGLTGYNDE HQENSNSLCS TKLSFGKLLE EEYSKEQPQN VFNDTLTRDF 480 LGVGQIVRQL SGGFSQYDMM QLQQGHQVSS KTSIREGREF GRD*

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MATNRFICEV CNKGFQREQN LQLHRRGHSL PWKLKQKSSK EVARKKVYLC PEPSCVHHDP  60
ARALGDLTGI KKHFSRKHGE KKWKCDKCSK KYAVQSDWKA HSKTCGTKEY RCDCGTLFSR  120
RDSFMTHRAF CEALAQENAM NPTNLSAITS QLFGHSLVAA NQISPHHQEL NFHKHSMQHS  180
DNLPAARSNG DGFRPFGSLL PPLNGSAFRP ISTDIVFGSS SYHQDDQDHH SPNKVFMTGM  240
MQQLPQDQIP SDQTDHSFFS NIASKNDSEN PTNNDSISIS HLSSSNLFAN RFSTSGGIGG  300
SFNSAQGPTS GLFSGNTIMG DQISPSLYSS AVSLQNSNNA SASAHLSATA LLQKAAQVGS  360
SCSINGSSAL LRSLGSSLSG PSSKLDLQAS PRAIDFKALL GDKDDKNLHE MISSLGGGGS  420
TTTSSMFGSL AKGLTGYNDE HQENSNSLCS TKLSFGKLLE EEYSKEQPQN VFNDTLTRDF  480
LGVGQIVRQL SGGFSQYDMM QLQQGHQVSS KTSIREGREF GRD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	46	KLKQKSSKEVARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-84	C2H2 family protein