PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0161.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 443aa MW: 49471.6 Da PI: 8.6096

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0161.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	50	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT +E+ +++da k++G W++I + +g ++t+ q++s+ qk+ Kaladp0036s0161.1.p 50 REKWTDQEHHKFLDALKLYGRA-WRLIEEFVG-TKTAVQIRSHAQKF 94 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDLIQTQPPL KDTATTLLLP QFKGSSSPLN QNDHLITPKL RKPYTITKQR EKWTDQEHHK 60 FLDALKLYGR AWRLIEEFVG TKTAVQIRSH AQKFFSKVVR GGNDSNESPI EVIEIPPPRP 120 KRKPTHPYPR KLVDSQNNLI SPSYQPGKRI CPHVLTTDSE NQSPNSVISA ATATPHKLEL 180 PVSDMPDSCL STSSCSSDLQ SGSFFSVDKE DGFKAINSTK YKGKHVLPTI KRSASSSVDN 240 LANLENKSFE EEADLPEATI MLFGQVLYTK DSQRPSTGGK GTFNPSEQQL AKTGNKHGKL 300 DESPALNNLD SQLSHGMYYE NWRPWSWNEM NSDLRGGSSC QWMPLPLYGG LPPPYHISCS 360 NAPTSSFVAE RTDGKERYSF MVKNDFTEET KDTAEAVNNI ASPKRSYKSG FVPYKRCSAP 420 ENINSAKAMT KEEDDQRVRL CL*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDLIQTQPPL KDTATTLLLP QFKGSSSPLN QNDHLITPKL RKPYTITKQR EKWTDQEHHK  60
FLDALKLYGR AWRLIEEFVG TKTAVQIRSH AQKFFSKVVR GGNDSNESPI EVIEIPPPRP  120
KRKPTHPYPR KLVDSQNNLI SPSYQPGKRI CPHVLTTDSE NQSPNSVISA ATATPHKLEL  180
PVSDMPDSCL STSSCSSDLQ SGSFFSVDKE DGFKAINSTK YKGKHVLPTI KRSASSSVDN  240
LANLENKSFE EEADLPEATI MLFGQVLYTK DSQRPSTGGK GTFNPSEQQL AKTGNKHGKL  300
DESPALNNLD SQLSHGMYYE NWRPWSWNEM NSDLRGGSSC QWMPLPLYGG LPPPYHISCS  360
NAPTSSFVAE RTDGKERYSF MVKNDFTEET KDTAEAVNNI ASPKRSYKSG FVPYKRCSAP  420
ENINSAKAMT KEEDDQRVRL CL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	5e-32	MYB_related family protein