PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0033s0140.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 156aa MW: 17878.3 Da PI: 10.6158 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 132.1 | 7.3e-41 | 8 | 137 | 37 | 170 |
YABBY 37 vrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvP 126 v C h s s + + ++++s+ + +++ + e+++ +e++ k ++++ +++++ + +l++ ++++++ +++PPekrqrvP Kaladp0033s0140.3.p 8 VVCQHGRSSCSSTAI-IKSSVSSHSQ-SSAFTSPESEQEREQEHHRKPTMMQIQQPKRVDE--MLNTFSKQKTSLFASINKPPEKRQRVP 93 556665555552222.2223333333.3345555555556666666666665555554444..577777777787889************ PP YABBY 127 saynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s ynrfi+eeiqrika+nPdi+hr+afsaaaknWa+fP+ihfgl Kaladp0033s0140.3.p 94 SVYNRFIREEIQRIKAGNPDITHRQAFSAAAKNWAYFPHIHFGL 137 ******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MWPLLQSVVC QHGRSSCSST AIIKSSVSSH SQSSAFTSPE SEQEREQEHH RKPTMMQIQQ 60 PKRVDEMLNT FSKQKTSLFA SINKPPEKRQ RVPSVYNRFI REEIQRIKAG NPDITHRQAF 120 SAAAKNWAYF PHIHFGLMPE ELHQPVTKKP NLLSR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 2e-35 | YABBY family protein |