PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0033s0028.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 31630.6 Da PI: 8.6435 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.2e-16 | 35 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll+++v ++G ++W+ +a+ g++Rt+k+c++rw++yl Kaladp0033s0028.2.p 35 KGPWTEQEDFLLANVVGLFGDRRWDFVAKVSGLNRTGKSCRLRWLNYL 82 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.4 | 5e-16 | 88 | 133 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E+ + +++++++G++ W++Iar+++ gRt++++k++w++++ Kaladp0033s0028.2.p 88 RGKMTSTEERIVLELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 133 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MHHSFGFGRQ VISIIGKNKA KTGEEANMMQ QDTRKGPWTE QEDFLLANVV GLFGDRRWDF 60 VAKVSGLNRT GKSCRLRWLN YLHPGLKRGK MTSTEERIVL ELHARWGNRW SRIARRLPGR 120 TDNEIKNYWR THMRKKAQER KRVNYLSITS SESYSSSSNH TQDSLSCSGK ESFYDTGGLA 180 AIAVTGKKQK EEEGERIKMD EIWNDIDISK DTITPLNDSY NQGLCTYSCA PLVSPIWEYC 240 PDPLWRMDED DSKMPPPSND YFQTCCEAGT STLKGP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 6e-87 | MYB family protein |