PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0032s0371.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | YABBY | ||||||||
Protein Properties | Length: 218aa MW: 24099.7 Da PI: 7.6331 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 236.9 | 4.4e-73 | 21 | 184 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaa.eshldeslkeelleelkveeenlksnvekeesas 93 s s+q+Cyv+Cn C+t+lavsvP ++lfk+vtvrCGhCt+llsvn++ a ++h ++ ++ ++ + +ee++++++ +++ + Kaladp0032s0371.1.p 21 SLSDQLCYVHCNLCDTVLAVSVPGSCLFKTVTVRCGHCTNLLSVNMRGLLLPPAPpSHHHAANFFNNPQNFMAMEEMQTNMTLMNQLPNP 110 679******************************************999885433303333556667777788888888888888777666 PP YABBY 94 tsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++ + +++ + e vpp++rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl Kaladp0032s0371.1.p 111 NEQMM-MMP--VQTEFLPVPPAVRPPEKRQRVPSAYNRFIKEEIQRIKAENPDISHREAFSAAAKNWAHFPHIHFGL 184 65544.433..344555599*******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSSSSASSFS PDHNILHHPP SLSDQLCYVH CNLCDTVLAV SVPGSCLFKT VTVRCGHCTN 60 LLSVNMRGLL LPPAPPSHHH AANFFNNPQN FMAMEEMQTN MTLMNQLPNP NEQMMMMPVQ 120 TEFLPVPPAV RPPEKRQRVP SAYNRFIKEE IQRIKAENPD ISHREAFSAA AKNWAHFPHI 180 HFGLLPDQPV KRSAANMLQQ KAGAAEGGFL VTDGILQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 4e-64 | YABBY family protein |